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Matt Sclafani

Scientists, clean-water advocates, elected officials and Setauket marina owners pose with buckets of shells stocked with larval oysters. Photo by Mallie Jane Kim

By Mallie Jane Kim

In the thick mud of low tide at Setauket’s Shore Road Marina, volunteers and scientists in knee-high rubber boots dumped out a jumble of shells along the shoreline — each with larval oysters attached, ready to grow and help eventually filter the water.

Photo by Mallie Jane Kim

This Nov. 25 “oyster planting” was part of a partnership between volunteer organization Setauket Harbor Task Force, which monitors area water quality, and the Cornell Cooperative Extension’s marine program. The planting of about 16,000 larval oysters was funded as part of an $80,000 water quality grant secured in 2022 through the effort of Suffolk County Legislator Steve Englebright (D-Setauket) during his time in the state assembly.

“We’re making the harbor clean today,” Englebright quipped during the event. “We’re taking the credit, but the oysters are doing all the work.”

Oysters filter feed, removing nitrogen and other harmful elements from the water, either consuming them or binding them into the mud. An adult oyster can filter as much as 50 gallons of water a day, according to the Chesapeake Bay Foundation.

The larval oysters planted in Setauket Harbor are about six months old and were procured by researchers from the Cornell Cooperative. The hope is that the shellfish will grow and spawn, eventually creating an oyster reef with critical mass that can help improve water quality. Marina owners Seth Walker and Mallory Guerin, who opened their shoreline to welcome this project, are also allowing the group to set up an oyster garden on a floating dock in 2025.

“This is a really important educational thing for the community,” said Matt Sclafani, the Cornell Cooperative senior extension resource educator. “When you get a community invested in it, then that increases ownership, and you get more people lobbying for things. Then you can have a bigger plan to improve the water quality.”

But oysters are only one step in the process of cleaning water.

Sclafani explained that a comprehensive water quality improvement plan must include reducing stormwater runoff as well as improving sanitation systems over the currently prevalent cesspools. 

“The oysters can’t do it on their own,” Sclafani said. “It’s a big picture, it’s a complex picture, but it starts here.”

Photo by Mallie Jane Kim

New York voters in November approved a proposition to add a .125% sales tax increase toward funding new sewers and replacing aging cesspools. According to the proposition, there are currently 209,000 cesspools in “environmentally sensitive areas” of Suffolk County. Additionally, the Town of Brookhaven in 2023 installed a drainage system along Route 25A in Setauket to help decrease the stormwater that was previously running straight into the harbor.

The town was also instrumental in the oyster-planting process. Town Councilmember Jonathan Kornreich (D-Stony Brook) led the council in designating the area as a management district, allowing the initiative to move forward with minimal bureaucracy since the work is intended to improve environmental conditions.

Setauket Harbor has long been restricted from shellfish harvesting because of unhealthy water quality and bacteria.

“This is one piece of a bigger puzzle for us, basically just trying to be stewards of these waters,” Kornreich said at the event. “It’s a full spectrum approach to trying to improve water quality, and shellfish mariculture is a really important piece of it.”

Activists, politicians, volunteers taking closer look at declining population of Long Island’s ocean life

Horseshoe crabs have been on Earth for almost 500 million years, but their future is uncertain. Researchers like Matt Sclafani, a marine educator from the Cornell Cooperative Extension in Riverhead, said he believes that the species is in an alarming decline.

“It’s a very important issue for a lot of reasons,” Sclafani said during a horseshoe crab monitoring session at West Meadow beach in Stony Brook on Monday night.

Horseshoe crabs are a valuable species to human life, Sclafani said. Their blue blood is used for pharmaceutical purposes. Fishermen use them as one of the most effective sources of bait that exists.

Sclafani called Delaware Bay the epicenter for horseshoe crab spawning activity, with Long Island coming in as a close second as one of the most important areas to the species on the East Coast, he said.

Sclafani and his team of volunteers take to the local shores when the tides are low, usually in the middle of the night, to count and tag horseshoe crabs that come up to the shore to spawn. On Monday, Sclafani was joined by Frank Chin, the regular site coordinator for West Meadow beach, along with Grace Scalzo, a volunteer, and Karen Papa and her sons — 12-year-old Zachary and 8-year-old Jonah.

North Shore activists take to the waters to learn more about the area horseshoe crabs. Photo by Alex Petroski
North Shore activists take to the waters to learn more about the area horseshoe crabs. Photo by Alex Petroski

“We get a lot of volunteers for this program,” Sclafani said. “That’s the part I think is really great, too. We get people involved in their backyards. There’s not a lot of marine life that you can get involved with and handle this directly — that comes right out onto the beach for you without a net or fishing pole.”

In all, the team tagged 55 horseshoe crabs over the course of the night, though that is nothing compared to the night on the South Shore when Sclafani said he and a team of about 35 volunteers tagged about 800 crabs. The process requires measurement, drilling a small hole into the shell, and then applying a round tag that has tracking information on it which is recorded.

“I think the entire population up and down the East Coast is in trouble,” Larry Swanson, associate dean of the Stony Brook University School of Marine and Atmospheric Sciences, said of the horseshoe crab population in an interview last week. “It’s in trouble for a variety of reasons including people overfishing the population, but also certain birds, including the red knot, are particularly prone to using them as a food source.”

Sclafani said the consequences could be dire, if the crabs are not saved.

“Their eggs are really important to the ecosystem,” Sclafani said. “A lot of animals feed on them, including migratory shore birds.”

Town of Brookhaven Supervisor Ed Romaine (R) divulged plans to urge the Department of Environmental Conservation to expand restrictions on harvesting horseshoe crabs in May, to the chagrin of fishermen. Those plans have since been tabled.

“I’m just a man, but I’m a vital part of the food chain and I think I’m at the top,” Ron Bellucci Jr. of Sound Beach said in an interview last month.

Horseshoe crab harvesting is a vital part of his income, he said. Local fishermen have also questioned the validity of claims about the declining population.

North Shore activists take to the waters to learn more about the area horseshoe crabs. Photo by Alex Petroski
North Shore activists take to the waters to learn more about the area horseshoe crabs. Photo by Alex Petroski

The idea that the species may not be declining is not an encouraging sign to Malcolm Bowman, professor of physical oceanography and distinguished service professor at SoMAS, Stony Brook. He is also the president of Stony Brook Environmental Conservancy and the Friends of Flax Pond, two environmental advocacy groups.

“We know in nature that things go up and down, and up and down, but you have to look at long-term trends; 10 years, 20 years,” Bowman said in an interview last week. “I’ve worked with fishermen a lot. They have to make a living, I understand that, but it’s important to keep communications between the scientists and say the fishermen with mutual respect, and that way we can learn a lot from them. We scientists are trained to have a long-term view. It’s not just this season, this summer, this breeding season. It’s a long-term view. I think that’s so important.”

More restricted areas, which Romaine is pushing for, could simply result in overharvesting in areas without restrictions, both Bowman and Sclafani said.

There has also been some experimentation with extracting the blue blood while the animal is still alive, then rereleasing them into the water. This process is called biomedical harvesting.

“That’s becoming a more and more controversial topic,” Sclafani said. “The biomedical companies have maintained that it’s a low mortality rate — about 10 percent … they might even be as high as 40 or 50 percent.”

He also mentioned that there are concerns about the horseshoe crabs’ spawning activity after this process is completed.

Bowman stopped short of saying that the extinction of the horseshoe crab would have a drastic impact on human life, but it’s not a good sign.

“I was reading some very important news that’s coming out about the extinction of species on the planet,” Bowman said. “Species are going extinct at a huge rate. The cumulative effect is going to have a very bad effect on human civilization, far greater than we can imagine. We only see a little piece of it.”