The winds have subsided, but Setauket and Stony Brook still have a lot of debris to clean up since last week’s brutal storm sent the North Shore for a spin.

An early morning windstorm made its way through the area early last Tuesday morning, toppling trees and downing power lines. The electricity has since been restored, a spokesman for PSEG Long Island said, and the utility has been providing more than 600 workers to ensure all temporary repairs are made permanent. Most roads have been cleared of fallen trees, and the town has been moving nearly 1,000 cubic yards of material a day amid cleanup efforts.

But there is still a ways to go.

Brookhaven Highway Superintendent Dan Losquadro (R) said it could take another two to three weeks for Setauket and Stony Brook to be declared 100 percent passable. In the immediate aftermath of the storm, Losquadro said his team buddied up with utility PSEG to help remove trees from roadways while grappling with fallen utility poles and electric wires. Now, he said it’s all about following through on the stragglers.

“This week, we’ve been bringing crews in an hour early each day to continue the debris removal process,” he said in a phone interview this week. “While we have shifted skeleton crews back out to their respective districts, a vast majority of my assets are still deployed in this area doing debris removal.”

Losquadro said the trucks were moving quickly to remove debris and bring it to his department’s Setauket yard to be handled. And he credited a big chunk of his team’s efficiency since the winds came barreling through on his emergency management preparedness.

“We had a plan set up with [the] waste management [department] that they would move their big grinder — the one at the Brookhaven landfill — to an area where we would stage material out of,” he said. “Now, we only have to handle the materials once.”

In prior storms, Losquadro said the town moved waste materials two to three times before they hit a landfill, which slowed down the recovery process and ended up costing more money. But the new plan has made cleaning up more efficient.

On a financial note, Losquadro said the storm will undoubtedly put a dent in his overall budget but his team would remain vigilant in tracking all costs and seeking reimbursement from the state, or the Federal Emergency Management Agency, when the recovery efforts conclude.

“It will be a significant number,” he said. “There’s no two ways about it. It’s a fact that that area was hit harder by this storm than it was hit by [Hurricane] Sandy.”

The highway superintendent said the hardest-hit areas in Setauket and Stony Brook should be able to fully put the storm behind them in a matter of two weeks or so.

“The fact that this was a localized event did allow me to pour many more assets into a smaller area to get the recovery done faster,” he said. “It also allowed PSEG to do the same thing. I, myself, could not be happier with the organization of my operation.”